Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Gm9522-201ENSMUST00000182394 926 ntBASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Gm6180-201ENSMUST00000065243 498 ntBASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Clrn2B2RVW2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Gm12138-201ENSMUST00000122180 951 ntBASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Gm3436-201ENSMUST00000179930 840 ntBASIC17.06■□□□□ 0.32
Clrn2B2RVW2 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.06■□□□□ 0.32
Clrn2B2RVW2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Clrn2B2RVW2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Gm45453-201ENSMUST00000211758 853 ntBASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clrn2B2RVW2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Gm22189-201ENSMUST00000103822 86 ntBASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clrn2B2RVW2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms