Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn7aB1AYL1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn7aB1AYL1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Scn7aB1AYL1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Gm11524-201ENSMUST00000119349 807 ntBASIC18.76■□□□□ 0.59
Scn7aB1AYL1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Gm6266-201ENSMUST00000203844 806 ntBASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn7aB1AYL1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Gm17150-201ENSMUST00000165577 381 ntBASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Mir497b-201ENSMUST00000093601 125 ntBASIC18.75■□□□□ 0.59
Scn7aB1AYL1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn7aB1AYL1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Gm19078-201ENSMUST00000206311 727 ntBASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn7aB1AYL1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn7aB1AYL1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms