Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC7.65□□□□□ -1.18
Ubr4A2AN08 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ubr4A2AN08 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ubr4A2AN08 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ubr4A2AN08 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC7.65□□□□□ -1.19
Ubr4A2AN08 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ubr4A2AN08 AC164087.2-201ENSMUST00000216206 1072 ntBASIC7.65□□□□□ -1.19
Ubr4A2AN08 Gm18615-201ENSMUST00000222919 1031 ntBASIC7.65□□□□□ -1.19
Ubr4A2AN08 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
Ubr4A2AN08 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm8706-201ENSMUST00000197372 1491 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm11801-201ENSMUST00000117807 746 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm12217-201ENSMUST00000118858 696 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm5909-201ENSMUST00000119768 1281 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm19208-201ENSMUST00000213861 912 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm8862-201ENSMUST00000198379 1346 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm11400-201ENSMUST00000120853 1214 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm2991-201ENSMUST00000173338 480 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm25927-201ENSMUST00000175058 117 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ubr4A2AN08 Gm5513-201ENSMUST00000072982 1218 ntBASIC7.64□□□□□ -1.19
Ubr4A2AN08 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Rarb-207ENSMUST00000225921 2756 ntBASIC7.63□□□□□ -1.19
Ubr4A2AN08 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Gm38144-201ENSMUST00000192790 465 ntBASIC7.63□□□□□ -1.19
Ubr4A2AN08 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ubr4A2AN08 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms