Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cfap99A0A140LIX9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cfap99A0A140LIX9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cfap99A0A140LIX9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cfap99A0A140LIX9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cfap99A0A140LIX9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cfap99A0A140LIX9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cfap99A0A140LIX9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cfap99A0A140LIX9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Cfap99A0A140LIX9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Gm10154-201ENSMUST00000084445 354 ntBASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap99A0A140LIX9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap99A0A140LIX9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Gm25287-201ENSMUST00000103846 110 ntBASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Gm22918-201ENSMUST00000103855 110 ntBASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap99A0A140LIX9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap99A0A140LIX9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms