Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm13597-201ENSMUST00000121239 375 ntBASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm10499-201ENSMUST00000174094 934 ntBASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm44492-201ENSMUST00000197012 141 ntBASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm23935-201ENSMUST00000102303 57 ntBASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm24270-201ENSMUST00000102326 57 ntBASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm24245-201ENSMUST00000157318 57 ntBASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms