Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm6433-201ENSMUST00000118634 875 ntBASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm10013-201ENSMUST00000106074 672 ntBASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms