Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.14□□□□□ -0.47
Trav18A0A075B656 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.14□□□□□ -0.47
Trav18A0A075B656 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Gm34391-201ENSMUST00000203706 907 ntBASIC12.14□□□□□ -0.47
Trav18A0A075B656 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav18A0A075B656 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.13□□□□□ -0.47
Trav18A0A075B656 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Gm7977-201ENSMUST00000193787 748 ntBASIC12.13□□□□□ -0.47
Trav18A0A075B656 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav18A0A075B656 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.13□□□□□ -0.47
Trav18A0A075B656 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.13□□□□□ -0.47
Trav18A0A075B656 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trav18A0A075B656 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav18A0A075B656 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav18A0A075B656 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Gm7222-201ENSMUST00000117512 906 ntBASIC12.12□□□□□ -0.47
Trav18A0A075B656 Gm12008-201ENSMUST00000117791 755 ntBASIC12.12□□□□□ -0.47
Trav18A0A075B656 Gm15173-201ENSMUST00000122049 433 ntBASIC12.12□□□□□ -0.47
Trav18A0A075B656 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav18A0A075B656 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav18A0A075B656 Gm27459-201ENSMUST00000184860 107 ntBASIC12.12□□□□□ -0.47
Trav18A0A075B656 Gm21362-201ENSMUST00000194272 928 ntBASIC12.12□□□□□ -0.47
Trav18A0A075B656 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav18A0A075B656 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms