Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav7n-4A0A075B620 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav7n-4A0A075B620 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Mir5122-201ENSMUST00000175004 89 ntBASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Trav7n-4A0A075B620 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav7n-4A0A075B620 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms