Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm3550W4VSN7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.58□□□□□ -0.39
Gm3550W4VSN7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Gm3550W4VSN7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Gm3550W4VSN7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3550W4VSN7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.57□□□□□ -0.4
Gm3550W4VSN7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Gm5864-201ENSMUST00000202263 970 ntBASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Gm7787-201ENSMUST00000216858 688 ntBASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3550W4VSN7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3550W4VSN7 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.56□□□□□ -0.4
Gm3550W4VSN7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3550W4VSN7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3550W4VSN7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms