Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb2S4R1M3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Psmb5-202ENSMUST00000227257 622 ntBASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb2S4R1M3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb2S4R1M3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Gm1401-201ENSMUST00000122048 772 ntBASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb2S4R1M3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms