Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20bQ9Z104 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20bQ9Z104 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmg20bQ9Z104 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Gm9385-201ENSMUST00000117563 472 ntBASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmg20bQ9Z104 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Olfr286-202ENSMUST00000205305 969 ntBASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hmg20bQ9Z104 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Gm12260-201ENSMUST00000122447 411 ntBASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Gm44492-201ENSMUST00000197012 141 ntBASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Gm44771-201ENSMUST00000206975 626 ntBASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmg20bQ9Z104 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms