Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Mir6977-201ENSMUST00000184960 64 ntBASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm5186-201ENSMUST00000218781 920 ntBASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1h3Q9Z0Y9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1h3Q9Z0Y9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1h3Q9Z0Y9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1h3Q9Z0Y9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1h3Q9Z0Y9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.08■□□□□ 0.17
Nr1h3Q9Z0Y9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1h3Q9Z0Y9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm8410-201ENSMUST00000117225 605 ntBASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Nr1h3Q9Z0Y9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm15483-201ENSMUST00000120338 456 ntBASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm17837-201ENSMUST00000186435 985 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms