Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcb1Q9Z0H3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Smarcb1Q9Z0H3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcb1Q9Z0H3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcb1Q9Z0H3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcb1Q9Z0H3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcb1Q9Z0H3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcb1Q9Z0H3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcb1Q9Z0H3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcb1Q9Z0H3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Gm5566-201ENSMUST00000116118 459 ntBASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcb1Q9Z0H3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Gm13823-201ENSMUST00000119930 345 ntBASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Gm14767-201ENSMUST00000121559 586 ntBASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcb1Q9Z0H3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Gm9719-201ENSMUST00000162765 543 ntBASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Gm17837-201ENSMUST00000186435 985 ntBASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms