Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cx3cr1Q9Z0D9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm8655-201ENSMUST00000221159 852 ntBASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cx3cr1Q9Z0D9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cx3cr1Q9Z0D9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms