Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm22065-201ENSMUST00000103753 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm22066-201ENSMUST00000103761 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm24932-201ENSMUST00000103763 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm24115-201ENSMUST00000103799 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm22190-201ENSMUST00000103827 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm22191-201ENSMUST00000103831 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm24721-201ENSMUST00000103849 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm28018-201ENSMUST00000103869 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm26399-201ENSMUST00000103937 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm22175-201ENSMUST00000175007 78 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm24158-201ENSMUST00000175263 71 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm25349-201ENSMUST00000177728 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm23616-201ENSMUST00000177797 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm25871-201ENSMUST00000177816 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm24752-201ENSMUST00000178240 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm24496-201ENSMUST00000178287 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm25649-201ENSMUST00000178476 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm25548-201ENSMUST00000178681 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm23147-201ENSMUST00000178841 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm26095-201ENSMUST00000179270 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm22171-201ENSMUST00000179283 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm23936-201ENSMUST00000179354 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm22619-201ENSMUST00000179516 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm25255-201ENSMUST00000179579 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm24755-201ENSMUST00000179691 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm26506-201ENSMUST00000179692 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm25086-201ENSMUST00000179931 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm23243-201ENSMUST00000180047 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm24659-201ENSMUST00000180212 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm24169-201ENSMUST00000180244 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm23689-201ENSMUST00000180354 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm27359-201ENSMUST00000184153 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm27785-201ENSMUST00000184268 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm27466-201ENSMUST00000184396 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm27703-201ENSMUST00000184836 110 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm10253-201ENSMUST00000194270 940 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx9Q9WUH2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lhx9Q9WUH2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms