Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn8aQ9WTU3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn8aQ9WTU3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Gm7063-201ENSMUST00000186840 981 ntBASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn8aQ9WTU3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn8aQ9WTU3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Gm7775-201ENSMUST00000218871 853 ntBASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Gm27321-201ENSMUST00000185021 205 ntBASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 AA619741-201ENSMUST00000195095 646 ntBASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn8aQ9WTU3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms