Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col13a1Q9R1N9 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Gm15487-201ENSMUST00000122373 465 ntBASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.62□□□□□ -0.39
Col13a1Q9R1N9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Gm6973-201ENSMUST00000117080 721 ntBASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col13a1Q9R1N9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col13a1Q9R1N9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms