Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Gm8655-201ENSMUST00000221159 852 ntBASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rfwd2Q9R1A8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfwd2Q9R1A8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Gm8097-201ENSMUST00000117903 829 ntBASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfwd2Q9R1A8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Gm19164-201ENSMUST00000210667 640 ntBASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rfwd2Q9R1A8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfwd2Q9R1A8 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms