Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn2Q9R0A1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Gm27525-201ENSMUST00000184465 107 ntBASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Gm6443-201ENSMUST00000203599 874 ntBASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn2Q9R0A1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcn2Q9R0A1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcn2Q9R0A1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms