Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Gm18057-201ENSMUST00000208220 503 ntBASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk3aQ9JKX8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3aQ9JKX8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Mir1895-201ENSMUST00000122615 79 ntBASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Gm27397-201ENSMUST00000184997 107 ntBASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk3aQ9JKX8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Gm11543-201ENSMUST00000120758 370 ntBASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Gm13365-201ENSMUST00000121188 973 ntBASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3aQ9JKX8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms