Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube3bQ9ES34 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 AA543401-201ENSMUST00000164248 1269 ntBASIC17.57■□□□□ 0.4
Ube3bQ9ES34 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube3bQ9ES34 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Auts2-212ENSMUST00000178555 309 ntBASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ube3bQ9ES34 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Gm13823-201ENSMUST00000119930 345 ntBASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.55■□□□□ 0.4
Ube3bQ9ES34 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3bQ9ES34 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Gm28630-201ENSMUST00000187806 498 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms