Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Olfr129-201ENSMUST00000122318 993 ntBASIC13.64□□□□□ -0.23
Dap3Q9ER88 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dap3Q9ER88 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.63□□□□□ -0.23
Dap3Q9ER88 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Gm15165-201ENSMUST00000118140 502 ntBASIC13.63□□□□□ -0.23
Dap3Q9ER88 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dap3Q9ER88 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.62□□□□□ -0.23
Dap3Q9ER88 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.62□□□□□ -0.23
Dap3Q9ER88 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Dap3Q9ER88 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms