Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Upf1Q9EPU0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Gm27331-201ENSMUST00000183705 60 ntBASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upf1Q9EPU0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Mir5120-201ENSMUST00000175020 78 ntBASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Gm2451-201ENSMUST00000199447 999 ntBASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Gm10290-201ENSMUST00000200451 999 ntBASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Upf1Q9EPU0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Gm13689-201ENSMUST00000119360 685 ntBASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Gm29396-201ENSMUST00000185659 716 ntBASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Gm29705-201ENSMUST00000212598 474 ntBASIC16.59■□□□□ 0.25
Upf1Q9EPU0 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.59■□□□□ 0.25
Upf1Q9EPU0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upf1Q9EPU0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Upf1Q9EPU0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Upf1Q9EPU0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
Upf1Q9EPU0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Upf1Q9EPU0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Upf1Q9EPU0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Upf1Q9EPU0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Upf1Q9EPU0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upf1Q9EPU0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upf1Q9EPU0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Upf1Q9EPU0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.57■□□□□ 0.24
Upf1Q9EPU0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Upf1Q9EPU0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upf1Q9EPU0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Upf1Q9EPU0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upf1Q9EPU0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upf1Q9EPU0 Gm15240-201ENSMUST00000118156 720 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms