Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ShpkQ9D5J6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Gm37856-201ENSMUST00000191634 999 ntBASIC12.37□□□□□ -0.43
ShpkQ9D5J6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
ShpkQ9D5J6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Gm16061-201ENSMUST00000122167 857 ntBASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ShpkQ9D5J6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Gm18284-201ENSMUST00000172604 624 ntBASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ShpkQ9D5J6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.34□□□□□ -0.43
ShpkQ9D5J6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ShpkQ9D5J6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms