Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps33aQ9D2N9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps33aQ9D2N9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps33aQ9D2N9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vps33aQ9D2N9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps33aQ9D2N9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps33aQ9D2N9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps33aQ9D2N9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps33aQ9D2N9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps33aQ9D2N9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms