Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nipsnap3bQ9CQE1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm7977-201ENSMUST00000193787 748 ntBASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nipsnap3bQ9CQE1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm18489-201ENSMUST00000172565 551 ntBASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm37153-201ENSMUST00000193637 231 ntBASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm6089-201ENSMUST00000197666 938 ntBASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm43347-201ENSMUST00000200226 580 ntBASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nipsnap3bQ9CQE1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm25990-201ENSMUST00000102440 86 ntBASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm5682-201ENSMUST00000173402 505 ntBASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm9682-201ENSMUST00000197505 556 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms