Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim16Q99PP9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.51□□□□□ -0.09
Trim16Q99PP9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.51□□□□□ -0.09
Trim16Q99PP9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.51□□□□□ -0.09
Trim16Q99PP9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.51□□□□□ -0.09
Trim16Q99PP9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim16Q99PP9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Gm8318-201ENSMUST00000182954 872 ntBASIC14.5□□□□□ -0.09
Trim16Q99PP9 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.5□□□□□ -0.09
Trim16Q99PP9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.5□□□□□ -0.09
Trim16Q99PP9 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.5□□□□□ -0.09
Trim16Q99PP9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim16Q99PP9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.49□□□□□ -0.09
Trim16Q99PP9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Gm27628-201ENSMUST00000184911 107 ntBASIC14.49□□□□□ -0.09
Trim16Q99PP9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.49□□□□□ -0.09
Trim16Q99PP9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.49□□□□□ -0.09
Trim16Q99PP9 Gm9682-201ENSMUST00000197505 556 ntBASIC14.49□□□□□ -0.09
Trim16Q99PP9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim16Q99PP9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim16Q99PP9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms