Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Gm16476-201ENSMUST00000221544 139 ntBASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim34aQ99PP6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Trim34aQ99PP6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Dupd1-202ENSMUST00000224735 548 ntBASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Asic1-205ENSMUST00000228185 1818 ntBASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim34aQ99PP6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Gm8749-201ENSMUST00000117737 331 ntBASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Gm27631-201ENSMUST00000184163 466 ntBASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Gm9182-201ENSMUST00000217829 639 ntBASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim34aQ99PP6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim34aQ99PP6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Gm4875-201ENSMUST00000118257 786 ntBASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Gm29667-201ENSMUST00000190817 490 ntBASIC18.17■□□□□ 0.5
Trim34aQ99PP6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim34aQ99PP6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms