Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Gm5682-201ENSMUST00000173402 505 ntBASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 BC037039-201ENSMUST00000192003 2205 ntBASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp1b1Q99LU0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.02□□□□□ -0.16
Chmp1b1Q99LU0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Chmp1b1Q99LU0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Gm43514-201ENSMUST00000198852 424 ntBASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Gm45167-201ENSMUST00000208007 322 ntBASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.01□□□□□ -0.17
Chmp1b1Q99LU0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms