Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.25■□□□□ 0.19
Smtnl1Q99LM3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Smtnl1Q99LM3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Gm23547-201ENSMUST00000158210 271 ntBASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Carlr-201ENSMUST00000181515 2574 ntBASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smtnl1Q99LM3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Gm7862-201ENSMUST00000121461 292 ntBASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Gm18246-201ENSMUST00000221023 728 ntBASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smtnl1Q99LM3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smtnl1Q99LM3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smtnl1Q99LM3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms