Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf3Q99LI7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cstf3Q99LI7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cstf3Q99LI7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cstf3Q99LI7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cstf3Q99LI7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cstf3Q99LI7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.33□□□□□ -0.11
Cstf3Q99LI7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cstf3Q99LI7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cstf3Q99LI7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cstf3Q99LI7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Gm11452-201ENSMUST00000122376 690 ntBASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf3Q99LI7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Gm18246-201ENSMUST00000221023 728 ntBASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf3Q99LI7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Gm13884-201ENSMUST00000118103 829 ntBASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Gm28659-201ENSMUST00000188013 759 ntBASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms