Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha3Q91Y16 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha3Q91Y16 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.48■□□□□ 0.07
Pcdha3Q91Y16 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Gm24513-201ENSMUST00000174964 138 ntBASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Gm44492-201ENSMUST00000197012 141 ntBASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms