Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb20Q91XZ9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Gm42478-201ENSMUST00000199252 1467 ntBASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb20Q91XZ9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Gm15427-201ENSMUST00000117288 531 ntBASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Gm37517-201ENSMUST00000194004 1289 ntBASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb20Q91XZ9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Gm38384-201ENSMUST00000195413 1122 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms