Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb3Q91XZ7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb3Q91XZ7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb3Q91XZ7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gm28659-201ENSMUST00000188013 759 ntBASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gm43347-201ENSMUST00000200226 580 ntBASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gm43377-201ENSMUST00000201640 455 ntBASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gm2594-201ENSMUST00000214774 742 ntBASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms