Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
Pcdhb8Q91XZ2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb8Q91XZ2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb8Q91XZ2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Gm12350-201ENSMUST00000121208 462 ntBASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Gm27300-201ENSMUST00000184085 97 ntBASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Gm27335-201ENSMUST00000184758 97 ntBASIC14.47□□□□□ -0.09
Pcdhb8Q91XZ2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms