Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.92■□□□□ 0.3
Trex1Q91XB0 Gm7488-201ENSMUST00000117148 684 ntBASIC16.92■□□□□ 0.3
Trex1Q91XB0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Gm27631-201ENSMUST00000184163 466 ntBASIC16.92■□□□□ 0.3
Trex1Q91XB0 Olfr286-202ENSMUST00000205305 969 ntBASIC16.92■□□□□ 0.3
Trex1Q91XB0 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.92■□□□□ 0.3
Trex1Q91XB0 Dupd1-202ENSMUST00000224735 548 ntBASIC16.92■□□□□ 0.3
Trex1Q91XB0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trex1Q91XB0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.91■□□□□ 0.3
Trex1Q91XB0 Gm37230-201ENSMUST00000194491 818 ntBASIC16.91■□□□□ 0.3
Trex1Q91XB0 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.91■□□□□ 0.3
Trex1Q91XB0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trex1Q91XB0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.9■□□□□ 0.3
Trex1Q91XB0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.9■□□□□ 0.3
Trex1Q91XB0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.9■□□□□ 0.3
Trex1Q91XB0 Gm15321-201ENSMUST00000121290 288 ntBASIC16.9■□□□□ 0.3
Trex1Q91XB0 Gm11424-201ENSMUST00000121929 829 ntBASIC16.9■□□□□ 0.3
Trex1Q91XB0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Gm46209-201ENSMUST00000217912 553 ntBASIC16.9■□□□□ 0.3
Trex1Q91XB0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.9■□□□□ 0.3
Trex1Q91XB0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.9■□□□□ 0.3
Trex1Q91XB0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trex1Q91XB0 BC037039-201ENSMUST00000192003 2205 ntBASIC16.89■□□□□ 0.29
Trex1Q91XB0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.89■□□□□ 0.29
Trex1Q91XB0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Gm9726-201ENSMUST00000180321 678 ntBASIC16.89■□□□□ 0.29
Trex1Q91XB0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Gm43703-201ENSMUST00000200523 763 ntBASIC16.89■□□□□ 0.29
Trex1Q91XB0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trex1Q91XB0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms