Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Gm9824-201ENSMUST00000178707 561 ntBASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Gm29541-201ENSMUST00000191351 678 ntBASIC15.43■□□□□ 0.06
Sh3d19Q91X43 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3d19Q91X43 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Auts2-212ENSMUST00000178555 309 ntBASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Gm5779-201ENSMUST00000218467 910 ntBASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.42■□□□□ 0.06
Sh3d19Q91X43 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3d19Q91X43 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Gm22175-201ENSMUST00000175007 78 ntBASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.41■□□□□ 0.06
Sh3d19Q91X43 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.41■□□□□ 0.06
Sh3d19Q91X43 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3d19Q91X43 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3d19Q91X43 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3d19Q91X43 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3d19Q91X43 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3d19Q91X43 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sh3d19Q91X43 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3d19Q91X43 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3d19Q91X43 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms