Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Gm15920-201ENSMUST00000118998 402 ntBASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Rpph1-201ENSMUST00000175096 319 ntBASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Gm2272-201ENSMUST00000194903 582 ntBASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx41Q91VN6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Ddx41Q91VN6 Gm11745-201ENSMUST00000121669 448 ntBASIC17■□□□□ 0.31
Ddx41Q91VN6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17■□□□□ 0.31
Ddx41Q91VN6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17■□□□□ 0.31
Ddx41Q91VN6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx41Q91VN6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Auts2-212ENSMUST00000178555 309 ntBASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Gm44335-201ENSMUST00000196879 141 ntBASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Gm44297-201ENSMUST00000198304 141 ntBASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Gm44346-201ENSMUST00000198851 141 ntBASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx41Q91VN6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ddx41Q91VN6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms