Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Odf4Q8VI88 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Odf4Q8VI88 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Gm25925-201ENSMUST00000158314 306 ntBASIC13.3□□□□□ -0.28
Odf4Q8VI88 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.3□□□□□ -0.28
Odf4Q8VI88 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Odf4Q8VI88 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.29□□□□□ -0.28
Odf4Q8VI88 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Gm6736-201ENSMUST00000166583 948 ntBASIC13.29□□□□□ -0.28
Odf4Q8VI88 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Gm27702-201ENSMUST00000184512 56 ntBASIC13.29□□□□□ -0.28
Odf4Q8VI88 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.29□□□□□ -0.28
Odf4Q8VI88 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.29□□□□□ -0.28
Odf4Q8VI88 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.29□□□□□ -0.28
Odf4Q8VI88 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.29□□□□□ -0.28
Odf4Q8VI88 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Odf4Q8VI88 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms