Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Gm11764-201ENSMUST00000120221 623 ntBASIC15.34■□□□□ 0.05
Trim60Q8VI40 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim60Q8VI40 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim60Q8VI40 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim60Q8VI40 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim60Q8VI40 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim60Q8VI40 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.33■□□□□ 0.04
Trim60Q8VI40 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim60Q8VI40 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44357-201ENSMUST00000195897 142 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm19658-201ENSMUST00000196231 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44367-201ENSMUST00000196836 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44350-201ENSMUST00000197197 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44390-201ENSMUST00000197533 144 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44313-201ENSMUST00000198018 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44486-201ENSMUST00000198508 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44314-201ENSMUST00000199263 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44394-201ENSMUST00000199558 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44484-201ENSMUST00000199873 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44466-201ENSMUST00000200264 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Gm44359-201ENSMUST00000200671 138 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim60Q8VI40 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.32■□□□□ 0.04
Trim60Q8VI40 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms