Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa1Q8VEE4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpa1Q8VEE4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpa1Q8VEE4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpa1Q8VEE4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpa1Q8VEE4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpa1Q8VEE4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpa1Q8VEE4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Gm23634-201ENSMUST00000175071 91 ntBASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpa1Q8VEE4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.94□□□□□ -0.02
Rpa1Q8VEE4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms