Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkd2Q8VE28 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Gm44872-201ENSMUST00000207864 420 ntBASIC13.53□□□□□ -0.24
Nkd2Q8VE28 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkd2Q8VE28 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nkd2Q8VE28 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Gm14701-201ENSMUST00000117156 348 ntBASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Gm9682-201ENSMUST00000197505 556 ntBASIC13.52□□□□□ -0.25
Nkd2Q8VE28 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Gm8396-201ENSMUST00000057361 823 ntBASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkd2Q8VE28 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkd2Q8VE28 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms