Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Gm18246-201ENSMUST00000221023 728 ntBASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm1Q8VC85 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Gm4899-201ENSMUST00000178708 719 ntBASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lsm1Q8VC85 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm1Q8VC85 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm1Q8VC85 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm1Q8VC85 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Lsm1Q8VC85 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm1Q8VC85 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Lsm1Q8VC85 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Lsm1Q8VC85 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms