Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc9Q8VC31 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Gm27463-201ENSMUST00000183569 57 ntBASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc9Q8VC31 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Gm42706-201ENSMUST00000199733 1910 ntBASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc9Q8VC31 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc9Q8VC31 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc9Q8VC31 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Ccdc9Q8VC31 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc9Q8VC31 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC17.83■□□□□ 0.45
Ccdc9Q8VC31 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc9Q8VC31 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc9Q8VC31 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ccdc9Q8VC31 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc9Q8VC31 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.82■□□□□ 0.44
Ccdc9Q8VC31 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc9Q8VC31 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc9Q8VC31 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc9Q8VC31 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms