Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nudcd3Q8R1N4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nudcd3Q8R1N4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd3Q8R1N4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nudcd3Q8R1N4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.84□□□□□ -0.03
Nudcd3Q8R1N4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nudcd3Q8R1N4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Gm23634-201ENSMUST00000175071 91 ntBASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nudcd3Q8R1N4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nudcd3Q8R1N4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 AA414768-201ENSMUST00000121924 1257 ntBASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Gm10499-201ENSMUST00000174094 934 ntBASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms