Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clrn1Q8K445 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.98□□□□□ -0.17
Clrn1Q8K445 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.98□□□□□ -0.17
Clrn1Q8K445 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.98□□□□□ -0.17
Clrn1Q8K445 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clrn1Q8K445 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.97□□□□□ -0.17
Clrn1Q8K445 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 AW822252-206ENSMUST00000208904 237 ntBASIC13.97□□□□□ -0.17
Clrn1Q8K445 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.97□□□□□ -0.17
Clrn1Q8K445 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clrn1Q8K445 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.96□□□□□ -0.17
Clrn1Q8K445 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Gm5177-201ENSMUST00000183092 997 ntBASIC13.96□□□□□ -0.17
Clrn1Q8K445 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.96□□□□□ -0.17
Clrn1Q8K445 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Clrn1Q8K445 Thap2-203ENSMUST00000218989 527 ntBASIC13.96□□□□□ -0.17
Clrn1Q8K445 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.96□□□□□ -0.17
Clrn1Q8K445 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.96□□□□□ -0.17
Clrn1Q8K445 Gm10154-201ENSMUST00000084445 354 ntBASIC13.96□□□□□ -0.17
Clrn1Q8K445 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms