Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Vps50Q8CI71 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps50Q8CI71 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps50Q8CI71 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vps50Q8CI71 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps50Q8CI71 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps50Q8CI71 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps50Q8CI71 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps50Q8CI71 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps50Q8CI71 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Gm37935-201ENSMUST00000192012 982 ntBASIC14.59□□□□□ -0.07
Vps50Q8CI71 Gm19164-201ENSMUST00000210667 640 ntBASIC14.59□□□□□ -0.07
Vps50Q8CI71 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.59□□□□□ -0.07
Vps50Q8CI71 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps50Q8CI71 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Vps50Q8CI71 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps50Q8CI71 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps50Q8CI71 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps50Q8CI71 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps50Q8CI71 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Gm14140-201ENSMUST00000119999 995 ntBASIC14.58□□□□□ -0.08
Vps50Q8CI71 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Vps50Q8CI71 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.57□□□□□ -0.08
Vps50Q8CI71 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps50Q8CI71 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.57□□□□□ -0.08
Vps50Q8CI71 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Vps50Q8CI71 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.57□□□□□ -0.08
Vps50Q8CI71 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms