Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pdlim5Q8CI51 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.23
Pdlim5Q8CI51 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pdlim5Q8CI51 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pdlim5Q8CI51 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim5Q8CI51 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Gm4899-201ENSMUST00000178708 719 ntBASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Gm5864-201ENSMUST00000202263 970 ntBASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Pdlim5Q8CI51 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Gm28659-201ENSMUST00000188013 759 ntBASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Gm18246-201ENSMUST00000221023 728 ntBASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim5Q8CI51 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms