Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ShfQ8CG80 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.23□□□□□ -0.29
ShfQ8CG80 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ShfQ8CG80 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.23□□□□□ -0.29
ShfQ8CG80 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ShfQ8CG80 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ShfQ8CG80 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.23□□□□□ -0.29
ShfQ8CG80 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.23□□□□□ -0.29
ShfQ8CG80 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.23□□□□□ -0.29
ShfQ8CG80 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.23□□□□□ -0.29
ShfQ8CG80 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ShfQ8CG80 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.23□□□□□ -0.29
ShfQ8CG80 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ShfQ8CG80 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.22□□□□□ -0.29
ShfQ8CG80 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
ShfQ8CG80 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.22□□□□□ -0.29
ShfQ8CG80 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ShfQ8CG80 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ShfQ8CG80 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.22□□□□□ -0.29
ShfQ8CG80 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ShfQ8CG80 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
ShfQ8CG80 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ShfQ8CG80 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.21□□□□□ -0.29
ShfQ8CG80 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ShfQ8CG80 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.21□□□□□ -0.29
ShfQ8CG80 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Ank2-226ENSMUST00000189368 339 ntBASIC13.21□□□□□ -0.29
ShfQ8CG80 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.21□□□□□ -0.29
ShfQ8CG80 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Gm18246-201ENSMUST00000221023 728 ntBASIC13.21□□□□□ -0.29
ShfQ8CG80 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.21□□□□□ -0.29
ShfQ8CG80 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ShfQ8CG80 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ShfQ8CG80 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.21□□□□□ -0.3
ShfQ8CG80 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms