Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.24■□□□□ 0.51
Smc4Q8CG47 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.24■□□□□ 0.51
Smc4Q8CG47 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc4Q8CG47 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.23■□□□□ 0.51
Smc4Q8CG47 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.23■□□□□ 0.51
Smc4Q8CG47 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.23■□□□□ 0.51
Smc4Q8CG47 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc4Q8CG47 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Gm45098-201ENSMUST00000207179 657 ntBASIC18.22■□□□□ 0.51
Smc4Q8CG47 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.22■□□□□ 0.51
Smc4Q8CG47 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smc4Q8CG47 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 BC037039-201ENSMUST00000192003 2205 ntBASIC18.21■□□□□ 0.51
Smc4Q8CG47 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 153.6 ms